Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSFSSLQDKGMKNSEFLKGEVSFEQKAKILLEALSSIPNFVGETFVIKCGGITISDETLFNTFVHNVVLLKQLGINPVIVHDGEYEIDSVLKILGINSKFVNDIRLTDKDTMRIIEMVLCGSINKKIVQHINSAGGSAIGLCGKDGNLIKAEKISTTLRENGSNNVEKILDMGFIGIPTEINPDILFFIEESDFIPVIAPIGHGKNGETYHIDADGAAGAIAVAVSASKMIIFSDVCEEMDKIDGR---KISVKNLNASINCGKIKGERFVEKLTACAKMVEECAGIAHIVNGRIPN-IMIDLFTESNSSVSIVNDL |
2BUF Chain:A ((9-296)) | ------------------------QVAKVLSEALPYIRRFVGKTLVIKYGGNAMESEELKAGFARDVVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRAKKLTVT-RQ--------IIDIGHVGEVTGVNVGLLNMLVKGDFIPVIAPIGVGSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDK-QGQVLTGLSTEQVNELIADGTIYGG-MLPKIRCALEAVQGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLISNRK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BUF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221982 for 2330 contacts (-95.3/contact) +
2D Compatibility (PS) -29828 + (NN) -9155 + (LL) 1740
1D Compatibility (HY) -26400 + (ID) 6300
Total energy: -291925.0 ( -125.29 by residue)
QMean score : 0.457
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