Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLQSIIKELQDFWIGEGCTILHPYTSEVGAGTLHPATIMSAIDVKPTKIAYLQPVVRPADGRYGDNPNRLYQHHQYQVIIKPSGNNLQDVYLSSLRALGISTEKYDIKFIEDDWENPSVGASGLGWEVTCNGMEVTQLTYIQQIGSINCRIIPGEVAYGLERLAMCIQGVNNVYDIIWND-NG--ITYGDIFKQREYELSYLALDYYNTEVVQQQFEDTEKLCKFLIEKELPVAAYDQCVKTSHLLNLLDARGILGVNERTAYIGRVRELTKKCCELYMSK |
| 3RF1 Chain:A ((31-303)) | ------ILNLQNYWQEQGCAIMQPYDMPAGAGTFHPATFLRSLGKKPWAAAYVAPSRRPTDGRYGENPNRLGAYYQFQVLIKPSPDNIQELYLKSLENLGFDLKSHDIRFVEDNWESPSLGAWGLGWEVWLDGMEVTQFTYFQQVGGIAVDLVSAEITYGLERIAMYLQNVDNVYDIVWSEFNGEKIKYADVHKQSEYEFSKYNFEVSDVKILNEQFENSYKECKNILEQGLALPAYDYCMLAAHTFNLLDARGAISVAQRQDYMLKIRELSKNCAEIYKKN |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RF1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -129053 for 2172 contacts (-59.4/contact) +
2D Compatibility (PS) -29371 + (NN) -12236 + (LL) 600
1D Compatibility (HY) -29600 + (ID) 6750
Total energy: -206410.0 ( -95.03 by residue)
QMean score : 0.520
|
|
|