Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRIPFLLILIIVIASLPVINNWLSYHNQTLNDDYIGERLDNYISRNFDKIIKILREESIKSNYAARDNATKGKILQYENKIFDLAYPYLGNENSNIIAVGFFDYSCGYCKAIKDDIKQLIN-DGKIKYIFRDTPILGNNSLKAAKSALAVYFIDKGKYFDFHYAILDHKGEFSDENILDIVKSIGINEDNFNNSMKNNAGKIEQMINDSKFLVRELGAGGTPFLIIGDSLFIGATDLDVLRKKVDELSHKQN
3GYK Chain:A ((15-169))---------------------------------------------------------------------------------------PVLGNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPNVRLVYREWPILGEGS--DFAARAALAARQQGKYEAFHWALMGMSGKANETGVLRIAREVGLDTEQLQRDME--APEVTAHIAQSMALAQKLGFNGTPSFVVEDALVPGFVEQSQLQDAVDRARKAA-


General information:
TITO was launched using:
RESULT:

Template: 3GYK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101143 for 1243 contacts (-81.4/contact) +
2D Compatibility (PS) -16720 + (NN) -11390 + (LL) 6936
1D Compatibility (HY) -10800 + (ID) 2350
Total energy: -135467.0 ( -108.98 by residue)
QMean score : 0.646

(partial model without unconserved sides chains):
PDB file : Tito_3GYK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GYK-query.scw
PDB file : Tito_Scwrl_3GYK.pdb: