Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIHVAIYMLLLCMSAMLYRIAKLSDIYNKALAFNHFSTQVILLITAVSIILDSFFLVDIALLYASVSFISTIALMRLMLL
1WAZ Chain:A ((41-66))
------------------------------------------------------GYLDYVLLPALAIFIGLTIYAIQRKR
General information:
TITO was launched using:
RESULT:
Template:
1WAZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7056 for 95 contacts (-74.3/contact) +
2D Compatibility (PS) -2612 + (NN) 942 + (LL) 6304
1D Compatibility (HY) 400 + (ID) 300
Total energy: -2322.0 ( -24.44 by residue)
QMean score : -0.137
(partial model without unconserved sides chains):
PDB file :
Tito_1WAZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WAZ-query.scw
PDB file :
Tito_Scwrl_1WAZ.pdb
: