Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGSIFIFLGICLVTISTIGVIRFTDFYTRLHAAGITDSSGAMLLLIGLALQNEFSVNTVKIVLLIFIIWVANSTNSYILARTHYKSKEKAIKES
3SI5 Chain:X ((11-21))
---------------------IDFNDFIKRLKTG-------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3SI5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1596 for 42 contacts (-38.0/contact) +
2D Compatibility (PS) -1362 + (NN) 609 + (LL) 7356
1D Compatibility (HY) 2000 + (ID) 0
Total energy: 7007.0 ( 166.83 by residue)
QMean score : -0.175
(partial model without unconserved sides chains):
PDB file :
Tito_3SI5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SI5-query.scw
PDB file :
Tito_Scwrl_3SI5.pdb
: