Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFKSVVLCILDGWGNGIGDSKY-NAISNANPPCWQYISSNYPRCSLSACGTDVGLPDGQIGNSEVGHMNICSGRVVMQSLQRIDREIKTIENNKN--LRSFISDLKDKNGVCHIMGLVSDGGVHSHQKHISTLANKISQHEIK-VVIHAFLDGRDTLPNSGKKCVQEFEENIKGNDI-RIATVSGRYYAMDRDNRWERTIETYEAIAFARATCHNNVMSLIDNNYQNNITDEFIRPTVIGDYKG-----IELKDGVLLANFRADRMIQLASILLGKTGYTEV------AKFSSILSMMKYKEDLQIPCLFPPAFFTNTLGEIIADNKLRQLRIAETEKYAHVTFFFNCGKEEPFSNEERILIPSPKVETYDLQPEMSAFELTEKLVGKIRSQEFTLIVANYANPDMVGHTGNMEAAKKAVLAVDDCLAKVLNTVKEINDAVLIVTADHGNVECMFDEKNNTPHTAHTLNKVPFIIYPNSCNNLKLKDGR-LSDIAPTILQLLGIKKPDEMTGSSLIV |
| 1EJJ Chain:A ((3-510)) | --KKPVALIILDGFA--LRDETYGNAVAQANKPNFDRYWNEYPHTTLKACGEAVGLPEGQMGNSEVGHLNIGAGRIVYQSLTRINIAIREGEFDRNETFLAAMNHVKQHGTSLHLFGLLSDGGVHSHIHHLYALLRLAAKEGVKRVYIHGFLDGRDVGPQTAPQYIKELQEKIKEYGVGEIATLSGRYYSMDRDKRWDRVEKAYRAMVYGEGPTYRDPLECIEDSYKHGIYDEFVLPSVIVREDGRPVATIQDNDAIIFYNFRPDRAIQISNTFTNED-FREFDRGPKHPKHLFFVCLTHFSETVAGYVAFKPTNLDNTIGEVLSQHGLRQLRIAETEKYPHVTFFMSGGREEEFPGEDRILINSPKVPTYDLKPEMSAYEVTDALLKEIEADKYDAIILNYANPDMVGHSGKLEPTIKAVEAVDECLGKVVDAILA-KGGIAIITADHGNADEVL-TPDGKPQTAHTTNPVPVIV---TKKGIKLRDGGILGDLAPTMLDLLGLPQPKEMTGKSLIV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EJJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -292636 for 4659 contacts (-62.8/contact) +
2D Compatibility (PS) -51835 + (NN) -8890 + (LL) -296
1D Compatibility (HY) -44800 + (ID) 11200
Total energy: -409657.0 ( -87.93 by residue)
QMean score : 0.484
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