Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKYIVFVLSYILGSIPFSLVITKIKGINLREVGSGNIGATNVARTGSKCIAALALLLDSLKGFIAVYIAKQFFDDGSFHMYASAILVVLGHMFPVWLKFSGGKGVATTLGILIALNISLVLAFVFVWLAVFFAFRYSSLASLTSTIAAVLSSFFFQRDLFFTLLTVAILIFFKHYRNIVNLLQGRERKFS |
1GV1 Chain:A ((6-37)) | --------------------------------IGAGNVGATTAFRIADKKLARELVLLDVVEGIPQGKGLDMYETGPVGLFDTKITGSNDYADTADSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPLDIMTHVAWVRSGLPKERVIGMAGVLDAARFRSFIAMELGVSMQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GV1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1326 for 138 contacts (-9.6/contact) +
2D Compatibility (PS) -3104 + (NN) 2062 + (LL) 3064
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -1954.0 ( -14.16 by residue)
QMean score : -0.035
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