Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTSAIFFSEGSYIVIMNNIIVKKFGGTSLTDLTR---VANLIKKDVDKGYRIIVVVSAIAGLTDQMVFQARQTLNLSHKQALSEYDVMLSAGEQISCGLLAITLLSIGVNAKSWLAWQLPIITDNSYSESKIKTIKIDHLKRSFAEGYTVAIIAGFQGIYDDR---ITTFGRGGSDISAVALAVAFGVRVCEIFTDIDGIYTADPKIVPKARKLKSISYDEMLEMSSSGAKILHNRSVQLAMKHNIKVQVLSTFKEVEGTAVLHENDVLER--------HTITGITYSTNEALITFTNFANTL----RTLKDMAGANIKIDMI-----HGSSIVISEFDIDLMKELLNKNE--------------------DYVINNNAAKISIIG---IGVMSVMYHTLKFFSEKKIEILAITASEIKISIIV-QRECAEALVRDLHTELMCTEGG |
| 3L76 Chain:A ((3-409)) | -------------------LIVQKFGGTSVGTVERIQAVAQRIKRTVQGGNSLVVVVSAMGKSTDVLVDLAQQ---ISPNPCRREMDMLLSTGEQVSIALLSLALQEIDQPAISLTGAQVGIVTE-------ILEIRPDRLEHHLREGKVV-VVAGFQGI----HLEITTLGRGGSDTSAVALAAALKADFCEIYTDVPGILTTDPRLVPEAQLMAEITCDEMLELASLGAKVLHPRAVEIARNYGIPLVVRSSWSDEPGTKVVAPP-VQNRSLVGLEIAKAVDGVEYDADQAKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIHDGNS---NDIAFTVVKDLLNTAEAVTSAIAPALRSYPEADQEAEIIVEKGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMISTSEVKVSCVIDQRDADRAIAALSNAFGVTLSPP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3L76.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -252619 for 2710 contacts (-93.2/contact) +
2D Compatibility (PS) -37163 + (NN) -6178 + (LL) 2384
1D Compatibility (HY) -32400 + (ID) 7000
Total energy: -332976.0 ( -122.87 by residue)
QMean score : 0.467
|
|
|