Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSDDKEERLLSEKHKSNPSMAVKWQRNIFTKTESQSSSKLYLVDLAKKSHKIISTPTSAYLPDWSHF
4HNA Chain:K ((217-249))
------------------------------TQTEQKLSGKLYLVDLA-GSEKVSKTGAEGAVLDEAKN
General information:
TITO was launched using:
RESULT:
Template:
4HNA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 917 for 96 contacts (9.6/contact) +
2D Compatibility (PS) -3397 + (NN) 367 + (LL) 2092
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -2821.0 ( -29.39 by residue)
QMean score : 0.359
(partial model without unconserved sides chains):
PDB file :
Tito_4HNA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HNA-query.scw
PDB file :
Tito_Scwrl_4HNA.pdb
: