Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDIIKTIEEKIRGSIDVIDVDIIDESVKHADHYFSSSSMLPSHIKLVLISDNFAGMDSLKRHRLIYELLKSEIE-LIHAISLHLYTQSEYNLKNK
2DHM Chain:A ((8-92))
MMIRERIEEKLRAAFQPVFLEVVDESYRH-----NVPAGSESHFKVVLVSDRFTGERFLNRHRMIYSTLAEELSTTVHALALHTYTIKEWEGLQD
General information:
TITO was launched using:
RESULT:
Template:
2DHM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59256 for 510 contacts (-116.2/contact) +
2D Compatibility (PS) -8854 + (NN) -1148 + (LL) 336
1D Compatibility (HY) -7600 + (ID) 1750
Total energy: -78272.0 ( -153.47 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_2DHM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DHM-query.scw
PDB file :
Tito_Scwrl_2DHM.pdb
: