Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVILKENIRTLGKLGEIVKVKPGYARNFLFPQRKAVKATKESIAKLEEQRSFLEEENIRKLNLASELAASF-AGKFVILVKQASEDGKIFGSVTTREVARSLSQE-YEVDHRKISF-NGVKIRNLGEYQASIEFHSEIVVQVAVHVVRSETDAHELRQVKSQSQKSQQQEAKQNEVGEATDSDKADQK |
| 2J28 Chain:H ((1-147)) | MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARRAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADAVTAAGVEVAKSEVRLPNGV-LRTTGEHEVSFQVHSEVFAKVIVNVVAE--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17864 for 746 contacts (23.9/contact) +
2D Compatibility (PS) -14050 + (NN) 8647 + (LL) 2580
1D Compatibility (HY) 10400 + (ID) 750
Total energy: 24691.0 ( 33.10 by residue)
QMean score : -0.034
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