Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSQSPKRMYGTGNNFVIIDSRSINNL--NWNYREIANQN---GCDQIIVITNSSAADCFMH--IYNADGGEVEMCGNAARCVGYLIMSEKSTEYATIELVNKRILECFKVGG-RSIKVNMGKPLFKWHEIPLSA----KCDPLHLPIELEMLKDPVAVNIGNPHMVFFVDNISEIPLQSLGPKLEKHTLFPKKVNVNIAQVEKSGEISLRVWERGTGITASCGSAACAALIASVLRGYLITRQTSVNLPGGKLLIEW---PDNIFMTGDIGFL |
| 1BWZ Chain:A ((5-263)) | -------KMHGLGNDFVVVDGVTQNVFFTPETIRRLANRHCGIGFDQLLIVEAPYDPELDFHYRIFNADGSEVSQCGNGARCFARFVTLKGLTNKKDISVSTQKGNMVLTVKDMNQIRVNMGEPIWEPAKIPFTANKFEKNYILRTDIQTVLCG---AVSMGNPHCVVQVDDIQTANVEQLGPLLESHERFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSGACAAVAVGIMQG-LLNNNVQVDLPGGSLMIEWNGVGHPLYMTGEATHI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BWZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178906 for 2045 contacts (-87.5/contact) +
2D Compatibility (PS) -26583 + (NN) -7959 + (LL) 236
1D Compatibility (HY) -20800 + (ID) 4700
Total energy: -238712.0 ( -116.73 by residue)
QMean score : 0.460
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