Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGVVFSGTQPSGVLHLGNYLGAIKQWVTLQDKYKSIFCIVDLYAITANKLSASELKSNIFKTAAAYIACGIDPEKSIIFNQSTISSHTELSWLLGCYTPVGWLNRMTQFKDKAGSDKQKASLGLYSYPVLMAADILLYRTKYVPVGDDQKQHLELARDIALAFNNHYKLGHFVIPEILVLDHASRIMSLRDGTSKMSKSPPSEYSCINLDDTDDLIVKKVGKAKTDS----ILGFDFATLKCRPEISNLINIYSVLSNLDVDKVCEEMNKYDMQHFKGELADLIISVISPIREEINDLLKDQSHLYRVLKKGTEKAAEIVGHNIKEIKNIIGFVQ |
3N9I Chain:A ((17-343)) | ---IVFSGAQPSGELTIGNYMGALRQWVQMQDDYDCIYCIVDLHAITARQDPAL-LRKRTLDTLALYLACGIDPKKSTIFVQSHVPEHSQLSWALNCYTYFGELSRMTQFKDKSARYAENINAGLFDYPVLMAADILLYQTNQVPVGEDQKQHLELSRDIASRFNNLYG-DIFKIPEPFIPKAGARVMSLQDPTKKMSKSDDNRNNVIELLEDPKSVVKKIKRAMTDSDEPALIRYD---VEKKAGVSNLLDILSGVTGQSIPELEAQFTGQMYGHLKGAVADAVSGMLSELQERYRTYREDEALLQDVMREGAAKARARAQVTLAKVYEAIGFVA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N9I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212286 for 2581 contacts (-82.2/contact) +
2D Compatibility (PS) -33965 + (NN) -13372 + (LL) 696
1D Compatibility (HY) -28400 + (ID) 7350
Total energy: -294677.0 ( -114.17 by residue)
QMean score : 0.511
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