Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRKEIRNLKIASVLRRAISKVLMEGKVFNKNVVISDVKLSGDLKKADVYIVLSSLSKKKYNINTVVDEINQSAWLIRKSILSYVDLRFIPKLVFKADLAFDNFVNISKILSNYT
3U1N Chain:A ((256-317))
--KEVGNLYDMFHTRNSLHRRAYQHKVGN----IIDTMITDAFLKADDYIEITGAGGKKYRISTAIDDMEAYTKLTDNIFLEILYSTDPKLKDAREILKQIEYRNLFKYVGETQ
General information:
TITO was launched using:
RESULT:
Template:
3U1N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3811 for 272 contacts (14.0/contact) +
2D Compatibility (PS) -6311 + (NN) -1323 + (LL) 676
1D Compatibility (HY) -1200 + (ID) 1050
Total energy: -5397.0 ( -19.84 by residue)
QMean score : 0.170
(partial model without unconserved sides chains):
PDB file :
Tito_3U1N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U1N-query.scw
PDB file :
Tito_Scwrl_3U1N.pdb
: