Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MENKLREIVLDTETTGLDI----ESGHRIIEIGCVELINRIPTGKVFHKYLNPERDIPYHSFKIHGISEEFLEDKPLFSDVVFEFLDFISGDILIIHNAEFDIKFLNMELGKLNARLISSD---RVLDTLPLARKKFVGSPASLSALCKRFDISLENRELHGALTDAGLLAKVYVELTGGLQTFLFDNECKQDHNSAFIQHKVRNLTCREHSPSNEEINEHRKLLGKIDNPLWKERIE
1J53 Chain:A ((7-180))
-----RQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRDIPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRTLHGALLDAQILAEVYLAMTG-----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1J53.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108204 for 1300 contacts (-83.2/contact) +
2D Compatibility (PS) -18177 + (NN) -10941 + (LL) 4016
1D Compatibility (HY) -16000 + (ID) 4300
Total energy: -153606.0 ( -118.16 by residue)
QMean score : 0.535
(partial model without unconserved sides chains):
PDB file :
Tito_1J53.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J53-query.scw
PDB file :
Tito_Scwrl_1J53.pdb
: