Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYILASLSLPFFITENYLLITALVPLLSAVVILFT-GKWPTVSNGITVASSVLL--FVYTCLCTLYWAYGDH--SQ--FILINFGN-NLHVSLKLESTGVVFSLLISFLWILTSIYTIYYMQNNYPDSNYSDFLCFLLVSISCTMFIAFSGDLLTTFVFYELLTISTYPLVTYNATN-ESTIAGRYYFGVLFFSSLVLFFPVLGLLYNEFHTLDF-----VSSGIFEFDTSLVTFTAVCFTMLIYG-LGKAALMPMHFWLPRAMVAPTPVSALLHAVAVVKSGAFIIVKV---------ILYTFGIDNLQRFAQQNWFAGGWLPYAAGFTIIAASLIALKQKELKRLLAYSTVSQLSYIILFASIFSDLSARVAIFQLVCHAFAKITLFFIAGSIITKT-GEKYIDRIHGIGRSMPVTMVAFAIGALSMIGVP-PASTFWGKFLIFQAVFNSGNIALSVFVTLVLTVGTVLNAMYFLPIIYNAFFSKSSKNFFIKKIPVFLILPPVITAI-CTFIIFLVTPFILPLC |
| 3RKO Chain:L ((2-473)) | ----------------NMLALTIILPLIGFVLLAFSRGRWSENVSAIVGVGSVGLAALVTAFIGVDFFANGEQTYSQPLWTWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMYASWYMRG---EEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDPKNGAAAMKAFVVTRVGDVFLAFALF-ILYNELGTLNFREMVELAPAHFADGNNMLMWATL---MLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGI-------------------VGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGV---QAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYLCFLVGGAALSALPLVTAGFFSKDEILAGAMANGHINLMV----AGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAVK-GVTHSLPLIVLLILSTFVGALIVPPLQGVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -590352 for 4149 contacts (-142.3/contact) +
2D Compatibility (PS) -44542 + (NN) -2807 + (LL) 3300
1D Compatibility (HY) -42000 + (ID) 6700
Total energy: -683101.0 ( -164.64 by residue)
QMean score : 0.296
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