Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHDKFDNVTFTINGTRESLFNFVFCEDQCTELSVQKTLDYLRARNIEATWVMNSHTKTQGILEKCGIKHVSTPKKVLLNMKNYFLPADVVPGLKLNAVTSSNLLKQLDSYTSKIFHHSIGIVSTFFRGLSNYDDKNSGLRFFLVTLNDEIIGTCGFYIQDSVA----GFYSDGVLPIYRNRGIGTQMVLDRIKIIQQLECKHV---VAHCMKPSVNLYKRLGFQILGNLYLYTSSA |
2GE3 Chain:A ((61-146)) | ---------------------------------------------------------------------------------------------------------------------------------------------FVAIADGDVIGWCDIRRQDRATRAHCGTLGMGILPAYRNKGLGARLMRRTLDAAHEFGLHRIELSVHADNARAIALYEKIGFAHEGRARDAVSID |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GE3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60800 for 450 contacts (-135.1/contact) +
2D Compatibility (PS) -8350 + (NN) 940 + (LL) 8864
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: -63996.0 ( -142.21 by residue)
QMean score : 0.386
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