Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKSFILSTGSYLPKKKLGNDEIALM--VETSDEWIRQRTGITQRYIADEAELTSDLAVNSAKNAIEKAQISVDEIGLIIVATTTPDKTLPSCATIAQNKLKCKN-AFSFDVQAACSGFIYAVTIADSLIKSNDRIKYALVIGAEIMSRIVDWKDRSTCVLFGDGAGAVIMKSTAHCNEMTENSTRGIISTNLYSDG-NVDVLCTKGGISSTGDSGK--IYMNGREVFKHAVDKLTASIEETLRCNNLKITDIDWLVPHQANIRIIEAVVKKLNFLMEKVINTVDQHANTSAASIPLALDYAIQKPKIKPGSLGILVAIGAGLTWGSVLLRY |
| 4DFE Chain:A ((12-333)) | ---SRVLGTGSYLPPNRVTNQDLAKRLAIETSDEWIVARTGIHARYFAEPDVTTSDLAFIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIRNHGAAFDVQAVCSGFAYAVATADSFIRSGQH-RTALVIGAETFSRILDFKDRTTCVLFGDGAGAVILQAS---------DEPGVLASALHADGSHSNILCTPGNVNGGVVSGSAFLHMDGQAVFKLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIRIMQSTCRKLGLPQERMIVTVGEHGNTSAASIPLALDVAVRDGRIKRGQNVLIEGVGGGFTWGASVIRY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DFE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -244325 for 2938 contacts (-83.2/contact) +
2D Compatibility (PS) -33007 + (NN) -10080 + (LL) 948
1D Compatibility (HY) -26400 + (ID) 8000
Total energy: -320864.0 ( -109.21 by residue)
QMean score : 0.483
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