Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLNEQPDVLTFLNSNLKGISKFHFGILSKLCGGNKVMDLLFYRPLSYVDRSK--SLLDARVGELTTFIAKIYEHQPPTFRGRPYKIVVESKS-QYIFIVFFN--YSIKYLYKLFPIGANVIISG--KLEKFAEHWQVTHPDYVLLDTNQFEEIARVEPVYQLCRGITNKSIRNIINSNLKELP-DLPEWIGDTLIKQNKWLSWKESIIKLHRPNSLAEAEICRRRLAYDELFAYQMALKLARENHVRKRGREFTISNKYKEQVLNELSFQLTNDQIRAIDEISERQKSKCRMVSLLQGDVGSGKTVVALFAMLNVIENNMQAALMAPTTILAEQHYNWIEEALSYTDIKIALLTGKTTRKERKIITNELASGILKIIIGTHALFQANVTFKNLGLAVIDEQQRFGVIQRNCLVGKGENADILFVTATPIPRTLQQAIYGDVECSILREKPKSRLPIKTVAMNIKKLVEVIEKLKSAINRGEKAYWICPCIGGNEGLNIAAAEMRFQELQKTFFNKVGIIHGKLTQVQKDQVMFSFKRNEFPLLVATTVIEVGIDVPDATIMIIENAEQFGLSQLHQLRGRVGRGNKPSFCVLLYNNISKSSFSKLKIMCESQDGFYIAEKDMMLRGSGDILGLKQSGCMEFKFADLYKDRELLNLAYNNTKSAIAENKSFELLLDIFEYRSRLHFSKFQ |
| 1GM5 Chain:A ((132-755)) | -----------------------------KKLGIETLRDLLEFFPRDYEDRRKIFKLNDLLPGEKVTTQGKIVSVETKKFQNMNILTAVLSDGLVHVPLKWFNQDYLQTYLKQL--TGKEVFVTGTVKSNAYTGQYEIHNAE---VTPKEGEYVRRILPIYRLTSGISQKQMRKIFEENIPSLCCSLKETLPERILEKRKLLGVKDAYYGMHFPKTFYHLEKARERLAYEELFVLQLAFQKIRKEREKHGGIPKKIEGKLAEEFIKSLPFKLTNAQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEAGFQTAFMVPTSILAIQHYRRTVESFSKFNIHVALLIGATTPSEKEKIKSGLRNGQIDVVIGTHALIQEDVHFKNLGLVIIDEQHRF-----EALMNKGKMVDTLVMSATPIPRSMALAFYGDLDVTVIDEMPPGRKEVQTMLVPMDRVNEVYEFVRQEVMRGGQAFIVYPLI--------KSAVEMYEYLSKEVF-KLGLMHGRLSQEEKDRVMLEFAEGRYDILVSTTVIEVGIDVPRANVMVIENPERFGLAQLHQLRGRVGRGGQEAYCFLVVGDVGEEAMERLRFFTLNTDGFKIAEYDLKTRGPGE----KQHGLSGFKVADLYRDLKLLEW---------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1GM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -282511 for 4605 contacts (-61.3/contact) +
2D Compatibility (PS) -63702 + (NN) -13069 + (LL) 5324
1D Compatibility (HY) -52400 + (ID) 11950
Total energy: -418308.0 ( -90.84 by residue)
QMean score : 0.367
|
|
|