Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKEKLFYTIGEVAEELHLEQHVLRFWESQFRQIKPIKRKGR--RLYDHKCIEVIKKIKYMLYDKGYTIKGVQKEFDNNIKSSCNFGNLLPQLIDLRDYLINKINSEKSNEQL
2JML Chain:A ((5-64))
---------IRTIARMTGIREATLRAWERRYGFPRPLRSEGNNYRVYSREEVEAVRRVARLIQEEGLSVSEAIAQVKTEPPRE------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2JML.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28761 for 349 contacts (-82.4/contact) +
2D Compatibility (PS) -5891 + (NN) -2078 + (LL) 2076
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -38454.0 ( -110.18 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_2JML.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JML-query.scw
PDB file :
Tito_Scwrl_2JML.pdb
: