Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNFEQIKKDITENDVVLYMKGTSDFPQCGFSGLVVSILKKLNVKFKYINVLENDEIRQSIKKFSNWPTIPQLYIKGEFIGGCDITREIYEKGELQSLLKEKKIVE
2LKU Chain:A ((11-100))
------LDKVVTSHKVVLFMKGTKDFPQCGFSQTVVQILKSLNAPFESVNILENELLRQGLKEYSSWPTFPQLYIDGEFFGGCDITVEAYKSGELQEQVEKAMCS-
General information:
TITO was launched using:
RESULT:
Template:
2LKU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71449 for 621 contacts (-115.1/contact) +
2D Compatibility (PS) -9767 + (NN) -2071 + (LL) 428
1D Compatibility (HY) -11600 + (ID) 2800
Total energy: -97259.0 ( -156.62 by residue)
QMean score : 0.688
(partial model without unconserved sides chains):
PDB file :
Tito_2LKU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LKU-query.scw
PDB file :
Tito_Scwrl_2LKU.pdb
: