Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRTFQPKNLIRKRRHGFRSRMATRAGRKILNRRRSLGCKKLCA
2FTC Chain:Q ((53-90))
----YQPSNIKRKNKHGWVRRLSTPAGVQVILRRMLKGRKSL--
General information:
TITO was launched using:
RESULT:
Template:
2FTC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 139897 for 595 contacts (235.1/contact) +
2D Compatibility (PS) -3453 + (NN) 1137 + (LL) 552
1D Compatibility (HY) -400 + (ID) 350
Total energy: 137383.0 ( 230.90 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_2FTC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FTC-query.scw
PDB file :
Tito_Scwrl_2FTC.pdb
: