Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHNQVIKHKKKDFSLAFKNKLALSNLFYRGLYISLYAIKERAPEKHVDIIRVGIVISKKAGKATKRNKIKRRLR--VLARTNILDISNIGYYYIILTHKNIMQASYKNLRKDITICLKKIK
1A6F Chain:A ((12-103))
--------KNEDFQKVFKHGTSVANRQF-----VLYTLDQ--PEN--DELRVGLSVSKKIGNAVMRNRIKRLIRQAFLEEKERLKEKD----YIIIARKPASQLTYEETKKSLQHLFRKSS
General information:
TITO was launched using:
RESULT:
Template:
1A6F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35799 for 593 contacts (-60.4/contact) +
2D Compatibility (PS) -9703 + (NN) -3952 + (LL) 1892
1D Compatibility (HY) -4400 + (ID) 1700
Total energy: -53662.0 ( -90.49 by residue)
QMean score : 0.448
(partial model without unconserved sides chains):
PDB file :
Tito_1A6F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A6F-query.scw
PDB file :
Tito_Scwrl_1A6F.pdb
: