Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRLLCEIEYEVRGMENIPKYPFVIASKHQSPLETFIFILLFRNAVFILKRELKWIPFIGLHLMALRMIFINRSDGINAMRHIIKLARMRIAENRSIIIFPEGTRTAAKQKTKYQPGIAALYSVLSVPVLPVALNTGLFWPKSILSMRRNPGKAVIEILPPIYHGLNKNEFLKNLEKTIEERSNKLTAEKN |
| 3T7Y Chain:A ((29-88)) | -------------------------------------------------KYKAPWIIAMGVNLRAKRIIAEAEKYGVPIMRN-VPLAHQLLDEGKELKFIPETTYEAVGEILLYITS-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T7Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13220 for 311 contacts (-42.5/contact) +
2D Compatibility (PS) -6509 + (NN) -2153 + (LL) 9920
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -15662.0 ( -50.36 by residue)
QMean score : 0.079
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