Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDKTTKNLLITEINKILPEDSQNRLISAVRYVLLAPAKHIRPFLVVASSQVFNVEIERVISIAMAVECIHTYSLIHDDLPCMDNSDTRRGQLSCHKRFDKATAVLAGDALLTLAFEILSS--LNEGSNKRCEIIKALSQAIGAKGMVGGQILDIKTALHVIQHHDYLDPESSVINEHTRQLCNKNRTLGSCAKITPDSKIKEIHLMKTAKLFAASCEIGAIIGSATDKQRRALYNYGVNLGLIFQAKDDIRDYKQDEV--NNLMSMLSKSEIENYIDNLFKQALDNLGELSGDTNYLYNLLNQ-VKRDD |
| 4KKM Chain:A ((48-317)) | -----------------VPEDPRRRLVEAMRYAAIGGGKRLRPLLVVATCALFNVDREAALRVGMAIECIHVYSLIHDDMPCMDNDDLRRGKPTVHKAFDDASAVLSGDALQALAFEILSEEKIHTDPHVRLELIQALAIASGKDGMVGGQAIDLAA-------------ETSTVPFDL-------------------PTITRLQQLKTGALFGFCLEAGAIMGRQNKDIRDRLKAYARDIGLAFQIADDLIDA-----GKATFLSLLGLEKARSQAQALVDQAIAHLSVFGSEADYLRSIARYIVA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KKM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158780 for 2016 contacts (-78.8/contact) +
2D Compatibility (PS) -26611 + (NN) -10914 + (LL) 3648
1D Compatibility (HY) -20800 + (ID) 5250
Total energy: -218707.0 ( -108.49 by residue)
QMean score : 0.517
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