Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSLVLVYTTFSNVKEAKAVSEELLNKKLIICVNIFPKVNSLYLWKGEINSSCEVIAIMKSRSDQVDKIVEKVEAMHSYDQPAIVIIPIEKVNKSFANWVNSVIDVSSIGV
1P1L Chain:A ((4-102))
-----FIYITAPSLEEAERIAKRLLEKKLAACVNIFP-IKSFFWWEGKIEAATEFAMIVKTRSEKFAEVRDEVKAMHSYTTPCICAIPIERGLKEFLDWIDETVE------
General information:
TITO was launched using:
RESULT:
Template:
1P1L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59812 for 662 contacts (-90.4/contact) +
2D Compatibility (PS) -10999 + (NN) -4196 + (LL) 892
1D Compatibility (HY) -10000 + (ID) 1950
Total energy: -86065.0 ( -130.01 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_1P1L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P1L-query.scw
PDB file :
Tito_Scwrl_1P1L.pdb
: