Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSKVLSIFACFLISFSSYANMFDWGTRKVSDTNTYVCNCNQGLADLVEELIPAVVNISSEQIIKQENNNRTKTPSFAPRNNFFDDFREFFEHFDQFFTDRNPSINREVVLLGSGFIIDK-SGTIVTNYHVIKNAQDITVTMNDNTYFKAEVLGYDARTDLAVLKIKADKDLSFVTFSNSDKARVGDTVMAIGNPFGLGGSVSTGIISARSRD-ISIGTTSEFIQTDAAINRGNSGGPLFDLNGKVIGINTAIYSPSESGGNVGIGFAIPSNLAISIIDTLKSGKKIKHGWLGVQVQPITREFAESLGLKDVKGALVANIVKDSPAEKGGIKVGDILLEFDGKKIDRMTQLPQMVSRTEPGKKVQIKLLRKGKEVNVKVVIEESVNDSKDSNTEENRSISDYITGLTVSNLPKEPKESKNDTPIKGVIVTNVDSNSNATLRGIKKGDIIIQLDGVDIENTENFQKQVD-----LAIK-KSGKDSIMLLIYRNGNQFFTSIKLKK |
3MH6 Chain:A ((15-448)) | -------------------------------------------LAPMLEKVMPSVVSINVE------GST------------------------------------QKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNAENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPD--GGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSS-----SIFNGIEGAEMSNKGKD----------QGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPSVLALNIQRGDSTIYLLMQ-------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3MH6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -126340 for 3206 contacts (-39.4/contact) +
2D Compatibility (PS) -42022 + (NN) -16186 + (LL) 6032
1D Compatibility (HY) -32800 + (ID) 8000
Total energy: -219316.0 ( -68.41 by residue)
QMean score : 0.456
|
|
|