Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLIRIGTRGSSLAIAQALEAKQKLLDLFSSLSVEIIKIKTSGDKYANANLAEIGGKGLFIKEIETELIKSNIDMAVHSLKDVPAFFSKDLTIPCILERLSPYDTFISNKYKSLKSLPQQAIIATSSIRRKVQLLNFRPDLNIVPLRGNVTTR---LQNQSFDGIILAEAGLIRLKKDYLITEVLSPKTMLSAVGQGAICIQCRKNDIKIIDLLEKINNNKSFIRVKSERSFMKTVNGSCFTPLAALAKYV-SENVLHLYCMLADKKNIYFTERTSFVEDAEKMGMDAGLELKSKCL
2YPN Chain:A ((5-294))-VLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMV-----------------GLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNGA


General information:
TITO was launched using:
RESULT:

Template: 2YPN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137050 for 2248 contacts (-61.0/contact) +
2D Compatibility (PS) -29096 + (NN) -13148 + (LL) 616
1D Compatibility (HY) -18400 + (ID) 5800
Total energy: -202878.0 ( -90.25 by residue)
QMean score : 0.383

(partial model without unconserved sides chains):
PDB file : Tito_2YPN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YPN-query.scw
PDB file : Tito_Scwrl_2YPN.pdb: