Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHKFAILFSILLAIVAYHLNNEVAFEVARLFSGIFISLLKLISLPLVFLSIVSTISGLKDSIEIKTLVKKTLFYTLLTTIIAAFVALSFYLLID-PVRKNFISNTIESASNSNYNYFSYLKLLIPSNFMQVFLKNNTIGSILIAFLMGRAIISL-------PKGKQDILHQVFSALFDTLLKIAQWLLKFIPLAVWSFITCFLHELKGGSEFYSLLWYFACIMSANSVQAFLILPLLMWCKGISPIQTLRGVMPALTLAFFSKSSSATLPTTIDCVQNKLKVPKKLSSFILPICTTINMNACATFILITVMFVAEMNGCTFSLSEIFIWIFLATGAAIGNAGVPMGCYFMATSYLVSMNVPL---------YIMGLILPIYTIIDMFETAINVWSDVCVTQIINKEYKGEI |
| 4KY0 Chain:A ((48-421)) | ------------------------------FGDLFVRLLKMLVMPIVLASLVVGAASISPARLGRVGVKIVVYY-LATSAMAVFFGLIVGRLFNVGANVNLGSGTGKAI------LVQTLLNIVPTNPFASLAKGEVLPVIFFAIILGIAITYLMNRNEERVRKSAETLLRVFDGLAEAMYLIVGGVMQYAPIGVFALIAYVMAE-QGVRVVGPLAKVVGAVYTGLFLQIVITYFILLKVFGIDPIKFIRKAKDAMITAFVTRSSSGTLPVTMRVAEEEMGVDKGIFSFTLPLGATINMDGTALYQGVTVLFVANAIGHPLTLGQQLVVVLTAVLASIGTAGVPGAGAIMLAMVLQSVGLDLTPGSPVALAYAM--ILGIDAILDMGRTMVNVTGDLAGTVIVAKTEKELD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KY0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -399495 for 3038 contacts (-131.5/contact) +
2D Compatibility (PS) -36322 + (NN) -14405 + (LL) 3784
1D Compatibility (HY) -30400 + (ID) 5250
Total energy: -482088.0 ( -158.69 by residue)
QMean score : 0.354
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