Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLRIIAGKYRGRRIATGKHLAARPTMSIVREAVFNILSSKKIIYNLNILDLFCGSGSFSFEALSRGAKHAFIVDLDYYNLQLPEKTAKDLGITDSITLICCSANA------------LPKPVSKCDIVFIDPPYYSNLVNSTLDGLANSGWLSDDALIILEVRKNEDFQCSKNFSVILERTYGIARIIFLSLST
2IFT Chain:A ((13-185))
-VRIIAGLWRGRKLPVL---------DRVKETLFNWLMP--YIHQSECLDGFAGSGSLGFEALSRQAKKVTFLELD--------KTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPPFHFNLAEQAISLLCENNWLKPNALIYVETEKDKPLITPENWTLLKEKTTGIVSYRLYQNLE
General information:
TITO was launched using:
RESULT:
Template:
2IFT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49766 for 1103 contacts (-45.1/contact) +
2D Compatibility (PS) -15610 + (NN) 3150 + (LL) 1668
1D Compatibility (HY) 2000 + (ID) 1050
Total energy: -59608.0 ( -54.04 by residue)
QMean score : 0.260
(partial model without unconserved sides chains):
PDB file :
Tito_2IFT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IFT-query.scw
PDB file :
Tito_Scwrl_2IFT.pdb
: