Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKTKLSLLLIAVFLLNIDFLLSCPVFADGVSGTDKTEFVSRF---SSAGSFSRA----SNP---DCGAFKTAAAIAGIAIAVGAVWTGIVLIFSSSGLFTALVIVGMIAAIVGVWKAIGGLVVCEHSFVRHPVARDHDGEYKDFALLDGGYADCTNKNYQKEDEYFSCLQNKTRKNANKEDYDRKRAEREALNPNVQNNTGNYYWPKNSVQYSEYIEVCHRNPLTFGNLFKKEDFDRRGEDKYINFDVREKDTGYVDGSWSPKVDGDLDCKVLKAGQSKTIHGSTFKALRKMGRLCVELASISTLGISMTPWPQGVDMGCTELPPDPLAPMCDESKMKFKNKGGIIITDPNPIKDLLKGNESKDYKTLIREREEKKEIFVGYDNKGCFSSYVSEACHNQAGSKSLAPIPITSMIVQCIKESLDNLVAGKGTPNGESFISVAQERLKNTITAVLVLALILFSIKAMSGGVHSPQEMYMLIIKFALVIYFTTGNTMSHYYGELTKLSNGLSEIVLKASSESKGICNYEAKDYKNDTTNYSYLAPWDRLDCRILFYLGAPLDGIAGKIGTGDVGILAILLGAAPALLVAGSVIGIICAGGQILVALVAIFMAIMMMMVILWMCYVFILSLIALSIIIILSPLFIPMVLFQHTKGYFDGWLRELITYSLYPVMLFAFLSFMFIACDKIYFKNLHFEKEEKIKILGNEKQWFKLKSGECDKNENTLACMMQNYKWEKSNILGLFDFTYMEFGNSLIGELLKLALILFLFYHFLNILPDMAAELSGNHRAALGSGATPGKMMSKAFSVAKAIAGAVGKAHSGDAAGAAKEAQKARDDSRALASGNADDKSGRSPATVGSEAANATGEAIRGTADAAQSAASEAANSTES |
4FLQ Chain:A ((408-458)) | -----------------------------GISGYDHRQFLNRFFVNRFDGSFARGVPFQYNPSTGDCRVSGTAAALVGLAQDDPHAVDRIKLLYSIALSTGGLPLIYLGDEVGTLNDDDWSQDSNKSDDSRWAHRPRYNEALYAQRNDPSTAAGQIYQDLRHMIAVRQSNPRFDGGRLVTFNTNNKHIIGYIRNNALLAFGNFSEYPQTVTAHTLQAMPFKAHDLIGGKTVSLNQDLTLQPYQVMWLEIA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FLQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196 for 180 contacts (-1.1/contact) +
2D Compatibility (PS) -4075 + (NN) 2066 + (LL) 45636
1D Compatibility (HY) -2800 + (ID) 1050
Total energy: 39581.0 ( 219.89 by residue)
QMean score : 0.232
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