Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKFRAIQSKNKSILSREVHAAEFIPYSCYWNSTTLITKQDWLVKFIKLSGFAFETADDEDLVIQNNIRNQMLRSISSPAFGLYFHTIRRKKNIFSDEFASQNFPNFFANHVNLKWREKHATRQSFINDLYITIIRRADTKGVEFLSHLLKKFGHVTSKHAWESDMRATYEDLEETTNRVMTNLRSYSPKILGVKETPNGLFCEIMEFLSRIVNCGFITNTLLPLKTEISRYLPVHRLFFGRKMIQVVTHNESKYAGIVSIKEYGNNTSAGMLDHFLQLPYEFIITQSFQFTNRQMAIAKMQIQQNRMIQSADKAISQIAEISHALDDAMSGRIVFGEHHLTILCIEKSPKSLDNALSFVESELSNCGVYPIREKVNLEPAFWAQVPGNFDYIVRKGTISSLNLAGFVSQHNYPTGNKFNNHWGDAVTVFDTTSGTPFFFNFHIRDVGHTMIIGPTGAGKTVLMNFLCAQAMKFSPRIFFFDKDRGAEIFLRALGGIYTLIEPRTKTNFNPLQLDDTPDNRTFLMEWIKSLISVYNDKFTSEDITRVNDAIEGNFKLRKEDRFLRNLVPFLGLAGSDTLAGAISMWHGNGSHAAIFDNKEDLLDFSKARVFGFEMASLLKDPIALGPVLIYLFHRISISLDGTPSIIVLDEAWALIDNPVFAPKIKDWLKVLRKLNAFVVFATQSVEDASKSAISDTLVQQTATQIFLPNLKATSIYRNVFMLTEREYILIKHTDPSTRFFLVKQGINAVVARIDLKGLDDIVNVLSGRAESVILLHDILKEVGDDPKVWLPIFYQKVKNV |
4ZPJ Chain:A ((307-413)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLYTAYNDTPESQEFVEA-------FTARHEG-ILPGLVDYAGYIGGRVIAEALTAIDGE------VENKEALLEALKAVEFTGPAGNFRFHPESQGPVTTILLCRVEQLDDGTYANIVVDRIPDFDDLSF--------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZPJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29717 for 675 contacts (-44.0/contact) +
2D Compatibility (PS) -11206 + (NN) -2131 + (LL) 49436
1D Compatibility (HY) -3600 + (ID) 1800
Total energy: 982.0 ( 1.45 by residue)
QMean score : 0.128
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