Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATHLSFRQGVQECIPTLLGYAGVGISFGIVASSQNFSILEIILLCLVIYAGAAQFIMCALFIAGTPISAIVLTVFIVNSRMFLLSMSLAPNFKTYGFWNRVGLGSLVTDETFGVAITPYLKGEAINDRWMHGLNITAYLFWAISCVAGALFGEYISNPQTLGLDFAITAMFIFLAIAQFESITKSRLRIYIVLIIAVIVMMLSLSMFMPSYLAILIAATISAALGVMMER |
| 3WU2 Chain:J ((9-24)) | -------------------------------------------------------------------------------------------------------------------------------------------PLWIVATVAGMGVIVI---------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3WU2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -5044 for 56 contacts (-90.1/contact) +
2D Compatibility (PS) -1673 + (NN) -213 + (LL) 20204
1D Compatibility (HY) -1200 + (ID) 200
Total energy: 11874.0 ( 212.04 by residue)
QMean score : -0.174
|
|
|