Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNRQSTKKALLIPFVIMIITAIVLMGVWFIFNSLIALIASIVLVVMIIVSIILFRQALMKMDSYVDGLSAQISTTNNKAIKHLPIGIIVLDENDHIEWVNQFMTNHMEANVISESVNEVFPNILKQLDRVKSVEIEYNQYHFQVRYSENDHCLYFFDITEQVQTNELYENSKPIIATLFLDNYDEITQNMNDTQRSEINSMVTRVISRWATEYNIFFKRYSSDQFVAYLNQKILADLEESKFDILSQLREKSVGYRAQLTLSIGVGEGTENLIDLGELSQSGLDLALGRGGDQVAIKSINGNVRFYGGKTDPMEKRTRVRARV-ISHALKDILAEGDKVIIMGHKRPDLDAIGAAIGVSRFAMMNNLEAYIVLNETDIDPTLRRVMNEIDKKSELRERFITSDDAWDMMTSKTTVVIVDTHKPELVLDENVLNKANRKVVIDHHRRGESFISNPLLIYMEPYASSTAELVTELLEYQPTEQRLTRLESTVMYAGIIVDTRNFTLRTGSR-TFDAASYLRAHGADTILTQHFLKDDV--DTYINRSELIRTVKVEDNGIAIAHGSDDKIYHPVTVAQAADELLSLEGIEA---------------SYVVARRED--NLIGISARSLGSVNV-QLTMEALGGGGHLTNAATQLKGVTVEEAIAQLQQAITEQLSRSEDA
3W5W Chain:A ((3-334))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TKVIAQAHIDHFTK-WFERADKIVIVSHVSPDGDAIGSSLGLYHF--LDSQDKIVNVIVPNAFPDFLKWMPG-SKDILLYDRYQEFADKLIMEADVICCLDFNALKRIDEMSDIVAASPGRKIMIDHHLYPEDFCR---ITISHPEISSTSELVFRLICRMGYFSDISKEGAECIYTGMMTDTGGFTYNSNNREIYFIISELLSKGID--------KDDIYRKVYNTYSE----SRLRLMGYVLSNMKVYKDYNSALISLTKEEQGKFDYIKGDSEGFVNIPLSIKNVCFSCFLREDTE-MIKISLRSVGKFPCNRLAAEFFNGGGHLNASGGEFYG-TMEEAVKVFEQAL----------


General information:
TITO was launched using:
RESULT:

Template: 3W5W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49170 for 2545 contacts (-19.3/contact) +
2D Compatibility (PS) -32605 + (NN) -6776 + (LL) 28188
1D Compatibility (HY) -18800 + (ID) 4400
Total energy: -83563.0 ( -32.83 by residue)
QMean score : 0.291

(partial model without unconserved sides chains):
PDB file : Tito_3W5W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3W5W-query.scw
PDB file : Tito_Scwrl_3W5W.pdb: