Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNWKLTKTLFIFVFILVNIVLVSIYVNKVNRSHINEVESNNEVNFQQEEIKVPASILNKSVKGIKLEQITGRSKDFSSKAKGDSDLTTSDGGKLLNANISQSVKVSDNNLKDLKDYVN--KRVFKGSE-----YQ----LSEINSG---SVKYEQTYDNFPILNNSKAMLNFNIEDNKAASYKQSMMDDIKPTDGADKKHQVIGVRKAIEALYYNRYLKKGDEVINARLGYYSVVNETNVQLLQPNWEIKVKHDGKDKTNTYYVEATNNNPKIINH |
1BIF Chain:A ((265-359)) | ------------------------------------------------------------------------------KGRIGGDPGLSPRGREFSKHLAQFI--SDQNIKDLKVFTSQMKRTIQTAEALSVPYEQFKVLNEIDAGVCEEMTYEEIQDHYP--------LEFALRDQDKYRYR--------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 18104 for 404 contacts (44.8/contact) +
2D Compatibility (PS) -8251 + (NN) 1871 + (LL) 12836
1D Compatibility (HY) -4800 + (ID) 1400
Total energy: 18360.0 ( 45.45 by residue)
QMean score : 0.109
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