Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEEL--------FSQIDRNIQDLNGILVTHEHIDHIKGLGVLAR-KYQLPIYANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAG-------FDVESFNVSHDAID--------PQFYIFHNNYKKFTILTDTGYVSDRMKGMIRGSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLNEHDIDTEKEVLLCDTDKAIPTPIYTI |
5A0T Chain:A ((33-187)) | ----------------NMTVFEYGGRLLIVDCGVLFPEEEQPGIDLILPDFTSIRDRLDDIEGIVLTHGHEDHIGGVPFLLREKPDIPLIGSKLTLALIEAK------LQEHRIRPYTLEVAEGHRERVGPFDCEFVAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLPLDGRLTD----------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5A0T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -23916 for 888 contacts (-26.9/contact) +
2D Compatibility (PS) -13925 + (NN) 432 + (LL) 8440
1D Compatibility (HY) -9200 + (ID) 2200
Total energy: -40369.0 ( -45.46 by residue)
QMean score : 0.386
|
|
|