Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLCEAVGSADQNHKTFKTFLFFTRKKKQKNLPSATSAKGGFALVLV
2K2W Chain:A ((223-249))
----------------KVFLFLNAKQ-YKKLSPAVLFGGGKTDL--
General information:
TITO was launched using:
RESULT:
Template:
2K2W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1381 for 130 contacts (-10.6/contact) +
2D Compatibility (PS) -2808 + (NN) 1367 + (LL) 1512
1D Compatibility (HY) -1600 + (ID) 500
Total energy: -3410.0 ( -26.23 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_2K2W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K2W-query.scw
PDB file :
Tito_Scwrl_2K2W.pdb
: