Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDIANMTIMLLIGVLGGFISGLIGIGGAIIIYPAILILPPLIGIPAYSAYIASGLTSSQVFFSTLSGSLNA-----RKQPAFSPKLVIYMGGGMLIGSMLGAILASLFNATFVNTVYVIIAILALILMFIKVKPTTQETKSKPLLFIIVGFGIGVISGIVGAGGAFIIIPVLLALFKLPMNTVVNNSIAIAFISSVGAFFIKLMQGYIPVESAIFLIIE |
2WU9 Chain:A ((305-382)) | ---------------------------AVGVDPAIMGIGPAVAIPA--AVKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARC---------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2WU9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -36018 for 399 contacts (-90.3/contact) +
2D Compatibility (PS) -7158 + (NN) 4642 + (LL) 12404
1D Compatibility (HY) -2800 + (ID) 1150
Total energy: -30080.0 ( -75.39 by residue)
QMean score : 0.062
|
|
|