Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKINRYITRGISEYLSLDLQILLWNMVKERDNQP----HTDY--------LHIFKLQEDENILSITHEQEQPAYKLEYHYTNYVKNQNALPKKVYVIREDGVDAFYYVMLLPEEY |
5A1U Chain:C ((268-339)) | ---------------SEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAHPNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDR---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5A1U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1950 for 258 contacts (7.6/contact) +
2D Compatibility (PS) -6120 + (NN) 2966 + (LL) 3672
1D Compatibility (HY) -4000 + (ID) 0
Total energy: -1532.0 ( -5.94 by residue)
QMean score : -0.015
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