Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MISTSEHSIFKNPAKNDGLRVRTIEVSEKFTSSAQNSDTIKKVVSQNNGHVLPIIAQFLLDNTNDVTSLFQKEDSVFYQLLSTESSNTGIRMIKHYATLTTTAHILNQSLDLQLNVSSIKNYLLSYHNETVSERSLADKAMDTIVQFIAENLGKFSQQTR------LANMIQNFGILSLKDDYIEVKIIRNVFDKMLTDSQFEDTKNVIDALDNAGKL--VSDRDRKTTKRNAKDDTGKSTSLVFYQIKIDLDYADVLGLQSQGRDNVIQKHSNPSQFKNTNLEEFMKSENTTLIVF |
1CF5 Chain:A ((76-236)) | --------------------------------------------------------------TRDVSYFFKESPPEAYNILFKGTRKITLPYTGNYENLQTAAHKIRENIDLGLPALSSAITTLFYYNAQS-----APSALLVLIQTTAE-AARFKYIERHVAKYVATNFKPNLAIISLENQWSALS--KQIF---LAQNQGGKFRNPVDLIKPTGQRFQVTNVDSDVVKGNIK--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 23600 for 1039 contacts (22.7/contact) +
2D Compatibility (PS) -15668 + (NN) 153 + (LL) 8364
1D Compatibility (HY) -6000 + (ID) 2050
Total energy: 8399.0 ( 8.08 by residue)
QMean score : 0.111
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