Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVLKWVSSYNNERDAWFVLYPPSKASSCFTLIVDVALFSE
3Q8U Chain:A ((136-147))
------ITSYASPRDAWL-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3Q8U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 470 for 33 contacts (14.2/contact) +
2D Compatibility (PS) -1063 + (NN) 511 + (LL) 2528
1D Compatibility (HY) -1600 + (ID) 300
Total energy: 546.0 ( 16.55 by residue)
QMean score : 0.092
(partial model without unconserved sides chains):
PDB file :
Tito_3Q8U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q8U-query.scw
PDB file :
Tito_Scwrl_3Q8U.pdb
: