Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQLQTMSNSIFIKNLIFAINESLEYSETNSVMEVTFQKAIGFTQYNFEGEKLKLKDDLKELISLVGREEAVLIFVNRLNEGLYCILNQLIEWDNLNYQFAMYKEAMHNYLFNTIEKLNDDTLFLLHQDGLITLPE---------HKYKTVAVKSTFGSRDFTFRFKFPEESDTVNTHQMLNKAISITGSLANTHLEQPQKYKAHFKKIPIETKNLTS |
4D4G Chain:A ((28-86)) | -----------------------------------------------------------------------------------------------------FKQSIHQ-LFETQVERTPEAVAVLSEQGQLTYEELNTKANQLAHYLRTLGVKS--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2917 for 175 contacts (-16.7/contact) +
2D Compatibility (PS) -4300 + (NN) 992 + (LL) 12868
1D Compatibility (HY) -3200 + (ID) 700
Total energy: 2743.0 ( 15.67 by residue)
QMean score : 0.038
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