Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMCKLEWDDEINFGKISFLSHSHIPDRKTGLELAEKYGIDGVMIGSGIFHNPFAFEKEPREHTSKELLDLLRLHLSLFNKYEKDEIRQFKSLRRFFKIYVRGIRALANFDIN
3B0P Chain:A ((194-240))
-----------DFPQLTFVTNGGIRSLEEALFHLKR--VDGVMLGRAVYEDPFVLEEADR----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3B0P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7935 for 246 contacts (-32.3/contact) +
2D Compatibility (PS) -5198 + (NN) -5130 + (LL) 5644
1D Compatibility (HY) -5200 + (ID) 650
Total energy: -18469.0 ( -75.08 by residue)
QMean score : 0.402
(partial model without unconserved sides chains):
PDB file :
Tito_3B0P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B0P-query.scw
PDB file :
Tito_Scwrl_3B0P.pdb
: