Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYYSYGNYEAFARPKKPENVENKSAYLIGSGLASLAAACFLIRDGQMEGSKIHILEELPKAGGSLDGENMPLKGYVVRGGREMENHFECLWDLFRSIPSLEIDNASVLDEFYWLNKEDPNYSRCRVIEKQGQRLVTDGDFTLTKTAIKEILDLCLTNEEDLDDVKITDVFSDDFFNSNFWIYWKTMFAFEPWHSAMEMRRYLMRFVHHIGGLADFSALKFTKYNQYESLVLPMVEYLKSHGVQFEYDVKVEDIKVDVTTSQKIAREILIHRHGKAESIKLTVDDLVFVTNGSITESSTYGDNDTPAPPTDELGGSWTLWKNLARQSPEFGNPDKFCQNIPKKSWFVSATSTTNNKEIIDTIESICKRDPLAGKTVTGGIITINDSAWQMSFTINRQQQFKDQPENEISTWIYALYSDVNGDYIKKPITECSGNEICQEWLYHLGVSTDKIEDLAKHVS-NTIPVYMPYITSYFMTRAIGDRPLVVPHQSQNLSFIGNFAETE-RDTVFTTEYSVRTAMEAVYQLLNIDRGIPEVINSTFDLRVLMDAVYELNDHQDLREITKDSKM-QKLALAGFLKKIKGTYIETLLKEHKLL |
4IA6 Chain:A ((1-591)) | MYYSNGNYEAFADPKKPAGVDKKSAYIIGSGLAGLSTAVFLVRDAQMKGENIHILEELPVAG------------FVVRGGREMENHFECLWDMYRSIPSLEVPGASYLDEYYWLDKEDPNSSNCRLIYNRGDRLPSDGQYGLGKCA-NEIVKLIMTPEKEIEGQTIEEFFSDEFFKTNFWTYWSTMFAFEKWHSLAEMRRYAMRFIHHIDGLPDFTALKFNKYNQYESMVKPLLAYLKDHGVQFEYDCHVKNVEVDHEGDSKIAKKIVMTQNGKDKEIDLTHNDIVFVTNGSITESSTYGDQNTPAPITNAKGDSWKLWENLAKQDPAFGHPDVFCENLPERSWFVSATATLENKKLAPYFERLTKRSLYDGKVNTGGIITIVDSNWELSFTIHRQPHFKSQNPDQIVVWIYALYSDTEGNYIKKRIVDCTGKEIAEELLYHLGVPESQISELASEENMNTVPVYMPYITSYFMPRRDGDRPDVVPEGSINLAFIGNFAESPTRDTVFTTEYSVRTAMEAVYTLLNVDRGVPEVFDSIYDIRQLLRAMYYMSDKKKLAD--QDMPLPEKLAVKTGMRKIKKTWVEELLKEANLV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IA6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -264210 for 5059 contacts (-52.2/contact) +
2D Compatibility (PS) -61241 + (NN) -33374 + (LL) 348
1D Compatibility (HY) -67200 + (ID) 17750
Total energy: -443427.0 ( -87.65 by residue)
QMean score : 0.474
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