Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKIRSFTILSLLIYLAMMCYTVVTYSKLPTKVPIHYNLAGDADNFADKWVLLLINSAFIVIWLIFFIAGRYYERFAKWSHYNHTPREIRAIKLFLSTLNLEIMSYMSIFTVLEIWQIQHHHQLNLLWFNMIFIIIIGLTLVIFCLLPTIHKMRDSQ |
| 3W5A Chain:C ((17-29)) | ----------------------------------------------------------------------------------------------------------------------------------------ITVILIWLLVRSY-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W5A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5384 for 43 contacts (-125.2/contact) +
2D Compatibility (PS) -1270 + (NN) -356 + (LL) 14608
1D Compatibility (HY) -2800 + (ID) 100
Total energy: 4698.0 ( 109.26 by residue)
QMean score : 0.259
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