Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLKPKYQIVIAGLCLAIVAILSLMIGNTLVSPGTVIQALFNFDSENDL----HDVVTGARASRTIIALLTGAALAVSGLLMQALTRNPIASPGLFGVNAGAVFFVIFSITFIQIQSFKMIVVIAFLGAIVVTILVVALGMFRQTLFSPHRVILAGAAIAMLFTAFTQGILIMNETD--LQGLLFWLSGSVSLRNIWDIPWIIPLVLILILIAFSMAAHINILMTSDDIATGLGQNIKLIKWMIIMLISMLAGISVAVAGSIVFVGLIVPNISKRLLPPNYKYLIPFTALAGAILMIISDIVARIIIKPLELPIGVVTAVIGAI---VLIYIMKKGRQRL |
| 2NQ2 Chain:A ((15-330)) | -------------LLLVITAVISLGIGRYSLSVPQI-------------DPVQQQVIFQVRLPRILTALCVGAGLALSGVVLQGIFRNPLVNPHIIGVTSGSAFGGTLAI-FFGFSLYGLFTSTILFG--FGTLALVFLFSFK----SLLMLILIGMILSGLFSALVSLLQYISDTEEKLPSIVFWLMGSFATSNWEKLLFFFVPFLLCSSILLSLSWRLNLLSLDEKEAKALGVKMAPLRWLVIFLSGSLVACQVAISGSIGWVGLIIPHLSRMLVGANHQSLLPCTMLVGATYMLLVDNVAR-SLSDAEIPISILTALIGAPLFGVLVYKL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NQ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -379925 for 2401 contacts (-158.2/contact) +
2D Compatibility (PS) -30383 + (NN) -14148 + (LL) 3716
1D Compatibility (HY) -32800 + (ID) 4900
Total energy: -458440.0 ( -190.94 by residue)
QMean score : 0.397
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