Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNHIHEHLKLVPVDKIDLHETFEPLRLEKTKSSIEADDFIRHPILVTAMQHGRYMVIDGVHRYTSLKALGCKKVPVQEIHETQYSISTWQHKVPFGVWWETLQQEHRLPWTTETRQEAPFITMCHGDTEQYLYTKDLGEAHFQVWEKVVASYSGCCSVERIAQGTYPCLSQQDVLMKYQPLSYKEIEAVVHKGETVPAGVTRFNISGRCLNLQVPLALLKQDDDVEQLRNWKQFLADKFANMRCYTEKVYLVEQ |
| 3VI3 Chain:B ((186-228)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------PCTSEQNCTT---PFSYKNVLSLTNKGEVFNELVGKQRISG---NLDSP--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VI3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1522 for 163 contacts (-9.3/contact) +
2D Compatibility (PS) -3927 + (NN) 2107 + (LL) 17336
1D Compatibility (HY) -1600 + (ID) 900
Total energy: 11494.0 ( 70.52 by residue)
QMean score : 0.128
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