Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKNVEKSFIKIGLYFQIAYIVLMAI---TLCGFVICYGLIFGLFYLLSGSRADYLIVTIVISAIISIFVI-ILSIVPVIVLASDLFKERISKGVILIVLAIIALVLCNFVSAILWFVSAISILGRKKLVAAADTTTIQKSKGNANQASHKDTCKKELDSQDMMEHPEVKNPTTKNLEGFNEEIHKDEATTKVVSDNTEPPIESKGHVSKKD |
| 3QJO Chain:A ((139-219)) | ----------KFGEFSSIFYLALQALEEDNYCDFEVQYEILHNEVHALIGGAEKYSMSTLEYSAFDPYFMIHHASLDKIWIIWQELQKRRV------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QJO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83708 for 435 contacts (-192.4/contact) +
2D Compatibility (PS) -7434 + (NN) 2578 + (LL) 9236
1D Compatibility (HY) -5600 + (ID) 1050
Total energy: -85978.0 ( -197.65 by residue)
QMean score : 0.337
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