Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MERVLITGGAGFIGSHLVDDL-QQDYDVYVLDNYRTGKRENIKSLADDHVFELDIREYDAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLRLLEIIKKYNSHIKRFIFASSA-AVYGD-LPDLPKSDQSLILPLSPYAIDKYYGERTTLNYCSLYNIPTAVVKFFNVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDFVYVYDVVQSVRLIMEHKDAIGHGYNIGTGTFTNLLEVYRIIGELYGKSVEHEFKEARKGDIKHSYADISNLK-ALGFVPKYTVETGLK---DYFNFEVDNIEEVTAKEVEMS |
| 4ZRM Chain:A ((6-307)) | ---ILVTGGAGFIGSHVVDKLIENGYGVIVVDNLSSGKVENLNRNA--LFYEQSIEDEEMMERIFSLHRPEYVFHLAAQASVAISVREPARDAKTNIIGSLVLLEKSIKYG--VKKFIFSSTGGAIYGENVKVFPTPETEIPHPISPYGIAKYSTEMYLEFFAREYGLKYTVLRYANVYGPRQDPYGE-AGVVAIFTERMLRGEEVHIFGDGEYVRDYVYVDDVVRANLLAMEKGD--NEVFNIGTGRGTTVNQLFKLLKEITGYDKEPVYKPPRKGDVRKSILDYTKAKEKLGWEPKVSLEEGLKLTVEYF------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ZRM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181773 for 2606 contacts (-69.8/contact) +
2D Compatibility (PS) -31232 + (NN) -6549 + (LL) 2352
1D Compatibility (HY) -23200 + (ID) 5950
Total energy: -246352.0 ( -94.53 by residue)
QMean score : 0.488
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