Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLATVGSLIVTSTLVFSSMPFQNAHADTTSMNVPNKQSQNVQNHRPYGGVVPQGMTQAQYTELEKTLPQLSAGSNMQDYNMKLYDATQNIADKYNVIITTNVGVFKPHAVRDMNGHALPLTKDGNFYQTNVDANGVNHGGSEMVQNKTGHMSQQDHMNQNTHMNQQPQIQQGHMQSSNHQMMSPKANMHSSNHQMNQSNKKVLPAAGESMTSSILTASIAALLLVSGLFLAFRRRSTNK |
| 1OG0 Chain:B ((213-333)) | --------------------------------------------------------------------------------------DACQAAAHSHHFMSVTKHGVAAITTTKG-NEHCFVILRGGK--GTNYDAKSVAEAKAQLPAGSNGLMIDYSHGNSNKDFRNQPKVNDVVCEQIANGENAITGVMIESN--INEGNQGI-PAEGKA------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OG0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 37339 for 671 contacts (55.6/contact) +
2D Compatibility (PS) -12207 + (NN) 2730 + (LL) 8700
1D Compatibility (HY) -2000 + (ID) 1500
Total energy: 33062.0 ( 49.27 by residue)
QMean score : 0.093
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